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Molecular Modeling of the Interaction Between Stem Cell Peptide and Immune Receptor in Plants

  • Muhammad Naseem
  • , Mugdha Srivastava
  • , Ozge Osmanoglu
  • , Jibran Iqbal
  • , Fares M. Howari
  • , Fatima A. AlRemeithi
  • , Thomas Dandekar
  • Zayed University, Abu Dhabi Campus
  • University of Würzburg

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

Abstract

Molecular docking enables comprehensive exploration of interactions between chemical moieties and proteins. Modeling and docking approaches are useful to determine the three-dimensional (3D) structure of experimentally uncrystallized proteins and subsequently their interactions with various inhibitors and activators or peptides. Here, we describe a protocol for carrying out molecular modeling and docking of stem cell peptide CLV3p on plant innate immune receptor FLS2.

Original languageEnglish
Title of host publicationMethods in Molecular Biology
PublisherHumana Press Inc.
Pages67-77
Number of pages11
DOIs
StatePublished - 2020
Externally publishedYes

Publication series

NameMethods in Molecular Biology
Volume2094
ISSN (Print)1064-3745
ISSN (Electronic)1940-6029

Keywords

  • CLV3p
  • Docking
  • FLS2
  • Modeling
  • Protein peptide interaction
  • Structure prediction

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