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Deep learning in drug discovery: a futuristic modality to materialize the large datasets for cheminformatics

  • Ali Raza
  • , Talha Ali Chohan
  • , Manal Buabeid
  • , El Shaima A. Arafa
  • , Tahir Ali Chohan
  • , Batool Fatima
  • , Kishwar Sultana
  • , Malik Saad Ullah
  • , Ghulam Murtaza
  • The University of Lahore
  • UVAS
  • Ajman University
  • Fatima College of Health Sciences
  • Bahauddin Zakariya University
  • Government College University Faisalabad
  • COMSATS University Islamabad

Research output: Contribution to journalReview articlepeer-review

16 Scopus citations

Abstract

Artificial intelligence (AI) development imitates the workings of the human brain to comprehend modern problems. The traditional approaches such as high throughput screening (HTS) and combinatorial chemistry are lengthy and expensive to the pharmaceutical industry as they can only handle a smaller dataset. Deep learning (DL) is a sophisticated AI method that uses a thorough comprehension of particular systems. The pharmaceutical industry is now adopting DL techniques to enhance the research and development process. Multi-oriented algorithms play a crucial role in the processing of QSAR analysis, de novo drug design, ADME evaluation, physicochemical analysis, preclinical development, followed by clinical trial data precision. In this study, we investigated the performance of several algorithms, including deep neural networks (DNN), convolutional neural networks (CNN) and multi-task learning (MTL), with the aim of generating high-quality, interpretable big and diverse databases for drug design and development. Studies have demonstrated that CNN, recurrent neural network and deep belief network are compatible, accurate and effective for the molecular description of pharmacodynamic properties. In Covid-19, existing pharmacological compounds has also been repurposed using DL models. In the absence of the Covid-19 vaccine, remdesivir and oseltamivir have been widely employed to treat severe SARS-CoV-2 infections. In conclusion, the results indicate the potential benefits of employing the DL strategies in the drug discovery process. Communicated by Ramaswamy H. Sarma.

Original languageEnglish
Pages (from-to)9177-9192
Number of pages16
JournalJournal of Biomolecular Structure and Dynamics
Volume41
Issue number18
DOIs
StatePublished - 2023

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being
  2. SDG 9 - Industry, Innovation, and Infrastructure
    SDG 9 Industry, Innovation, and Infrastructure

Keywords

  • Drug discovery
  • SARS-CoV-2
  • SMILES format
  • artificial intelligence
  • database
  • deep learning
  • deep learning algorithms
  • drug design

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